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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015839403.1_cds_XP_016507281.1_20423
CDS Infomation

[gene=LOC107824972] [db_xref=GeneID:107824972] [protein=endoglucanase 12-like] [protein_id=XP_016507281.1] [location=complement(join(47783..48184,48737..48909,49310..49907,50865..51172,55312..55735))] [gbkey=CDS]
Sequence

ATGCACTCAGCAAATCATTGGGGAGGATCATTAGAAATAGCGAACAACGGCGATTCAACG
GCGGAGGAATACGATCGGAGTCGGAATTTGGATTGGGACAAAGCATCAATAAATCATCAA
CAACAACAACAGTATAATAACTACGATCAATATTCTCATCGGCATAATTTAGATGAAACG
CAACAGAGTTGGTTATTAGGTCCGCCGGAGAAGAAGAAGAAGAAACACGTCGATTTAGGA
TGTATTGTTTGCAGCAGAAAAGCATTCAAATATACAATTTATGGAATTATTATCGCTTTT
CTCGTCATCGCTCTGCCTACGATCATTGCCAAAACTTTGCCTAAGCATAAAACTCGGCCT
TCTCCTCCTGATAATTACACTATTGCCCTTCACAAAGCTCTTCTCTTCTTCAACGCTCAA
AAATCTGGAAAATTGCCAAAAAGCAATGGGATCCCATGGAGAGGAGACTCAGGTTTAAAA
GATGGATCAAAACTCACAGACGTTAAAGGAGGGCTGATTGGAGGGTACTATGATGCTGGA
GATAACACAAAATTTCACTTTCCAATGTCATTTGCAATGACAATGTTGAGTTGGAGTGTC
ATTGAATATGAACACAAGTACAGAGCCATTGGAGAGTATGATCATGTCACAGATCTCATC
AAATGGGGCACTGATTACTTGCTTCGTACTTTCAACTCCACTGCCACTAAAATTGACAAA
ATTTATAGCCAGGTTGGTGGTTCTCTAAATAATTCAAGAACACCAGATGATCACTACTGC
TGGCAAAGGCCAGAAGACATGACTTACGAACGCCCTGTTCAAACAGCTAATTCGGGGCCT
GATCTAGCCGGTGAAATGGCAGCAGCATTGGCTGCAGCCTCCATAGTATTCCGCGACAAC
ACACAATATTCAAGAAAGCTCGTTAAAGGAGCAGAGACCCTGTTTGCTTTCGCCCGTGAC
TTTGGCAAACGGACTTCATATTGCCGCGGAAATCCTTACATTGAACCTTTCTACAACTCC
ACAAACTATTTCGACGAGTTCATGTGGGGATCAGCTTGGCTATATTATGCTACTGGCAAT
AAAACTTATATATCGTTGGCGACTAATCCTGGATTGTCCAAGAATTCCAAGGCGTTTTTC
ATGATCCCGGATTTAAGCGTGTTGAGCTGGGATAACAAATTGCCTGCAGCTATGTTGCTG
TTAACTAGGATGAGGATATTCTTGAATCCAGGTTACCCTTATGAGGAAATGTTGAGTAGC
TATCACAACGTCACTAGTCTTACCATGTGTTCCTACCTACAGAGGTACCAAGTCTTCAAC
TTCACCAAAGGTGGACTGATCCAGTTGAATCATGGCCGTGGACAATCGTTACAGTATGTG
GCCAATGCAGCATTTTTGGCATCACTCTTTGTTGATTACATGAATGCCACTGGTGTTCCA
GGATGGAACTGTGGCCCTACCTATATCTCCTTGGATGTTCTTCGCCGTTTTGCCACTTCC
CAGATGAATTATATTTTAGGTGACAATCCCTTGAAGATGAGCTATGTAGTAGGGTATGGA
AACAAATTCCCAAGGCATGTACATCATAGGGGTGCATCAATACCCTCTGGTAAAACAAAG
TACTCATGCACTGGAGGGTGGAAATGGAGAGACACCAGTAATCCCAATCCTCATAACATA
ACAGGAGCTATGGTAGGAGGACCTGATAAGTTTGATAGGTTCAAAGACGCGCGCAAAAAT
TTCAGCTATACAGAGCCAACACTAGCAGGAAATGCAGGACTAGTTGCTGCACTGGTTTCT
TTAACCAGCAGTGGTGGCTATGGCGTTGACAAAAATACCATTTTCTCAGCTGTTCCACCT
TTATATCCAATGAGCCCACCCCCACCTCCACCATGGAAACCATAA

Peptide Sequence

PEP ID

XP_016507281.1
PEP Infomation

PREDICTED: endoglucanase 12-like [Nicotiana tabacum]
Sequence

MHSANHWGGSLEIANNGDSTAEEYDRSRNLDWDKASINHQQQQQYNNYDQYSHRHNLDET
QQSWLLGPPEKKKKKHVDLGCIVCSRKAFKYTIYGIIIAFLVIALPTIIAKTLPKHKTRP
SPPDNYTIALHKALLFFNAQKSGKLPKSNGIPWRGDSGLKDGSKLTDVKGGLIGGYYDAG
DNTKFHFPMSFAMTMLSWSVIEYEHKYRAIGEYDHVTDLIKWGTDYLLRTFNSTATKIDK
IYSQVGGSLNNSRTPDDHYCWQRPEDMTYERPVQTANSGPDLAGEMAAALAAASIVFRDN
TQYSRKLVKGAETLFAFARDFGKRTSYCRGNPYIEPFYNSTNYFDEFMWGSAWLYYATGN
KTYISLATNPGLSKNSKAFFMIPDLSVLSWDNKLPAAMLLLTRMRIFLNPGYPYEEMLSS
YHNVTSLTMCSYLQRYQVFNFTKGGLIQLNHGRGQSLQYVANAAFLASLFVDYMNATGVP
GWNCGPTYISLDVLRRFATSQMNYILGDNPLKMSYVVGYGNKFPRHVHHRGASIPSGKTK
YSCTGGWKWRDTSNPNPHNITGAMVGGPDKFDRFKDARKNFSYTEPTLAGNAGLVAALVS
LTSSGGYGVDKNTIFSAVPPLYPMSPPPPPPWKP

Transcript Sequence

Gene sequence data has not been registered.